Posts

Querying NCBI dbSNP for rsID mergers with Python (a.k.a. where is RsMergeArch.bcp.gz?)

Watterson estimator calculation (theta or $\theta_w$) under infinite-sites assumption

Nucleotide diversity (pi or $\pi$) calculation (per site and per window)

Postmortem: Chillennium 2016 48-Hour Game Jam - Tardigrade's Dangerous Day

Postmortem: 3D sorghum reconstructions from depth images identify QTL regulating shoot architecture

Our first bioRxiv submission

Robot Hexapod (RHex)

Getting started with Intel's Threading Building Blocks: installing and compiling an example that uses a std::vector and the Code::Blocks IDE

Access point correspondences from registration method in Point Cloud Library (a.k.a. access protected member in library class without modifying library source).

Resumes and C.V.s for graduating Ph.D.s

Procedural content generation: map construction via blind agent (a.k.a. building a Rogue-like map)

Procedural content generation: map construction via binary space partitioning (a.k.a. building a Rogue-like map)

Rotate 3D vector to same orientation as another 3D vector - Rodrigues' rotation formula

Desktop Screen Recording and Video Editing (Ubuntu 14.04)

Find minimum oriented bounding box of point cloud (C++ and PCL)

Postmortem: RIG: Recalibration and Interrelation of Genomic Sequence Data with the GATK

Postmortem: Resolution of Genetic Map Expansion Caused by Excess Heterozygosity in Plant Recombinant Inred Populations

OpenCV Mat types

Installing Point Cloud Library and configuring Code::Blocks to compile (Ubuntu 14.04 LTS)